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Applied Microbiology and Biotechnology (v.47, #2)

Biological bleaching of water-soluble coal macromolecules by a basidiomycete strain by G. Willmann; R. M. Fakoussa (pp. 95-101).

There is need for new effective technologies to convert coal into environmentally acceptable liquid fuels. Thermochemical coal-conversion processes occur under extreme conditions. Thus there is a potential to use the biotransformation of coal as a cheap alternative method. A basidiomycete strain, which decomposes coal macromolecules, was isolated from humic-acid-rich soil of a lignite surface-mining region. The isolate showed the ability to decolorize liquid dark-brown media containing water-soluble coal-derived substances (humic acids). The presence of an easily available substrate is necessary for the biodegradation. The influence of different culture conditions on the bleaching effect was studied. Evidence for decomposition of water-soluble coal substances was provided by measuring the decrease of absorbance and the modification in the distribution of molecular masses. The degradation process resulted in a complete decolorization of the coal-derived humic acids and was also combined with massive alterations in their molecular structure. Solid-state #13C-NMR spectroscopy showed an increase of carboxylic groups as well as hydroxylated and methoxylated aliphatic groups, which indicates an oxidative attack. Enzymatic analysis showed the presence of a Mn peroxidase in the culture supernatant. Extracellular lignin peroxidase and laccase activities were not detectable. The production of the peroxidase was induced by addition of humic acids. But, in vitro, this enzyme did not cause a decolorization or reduction in molecular mass of the coal-derived humic acids.

Effect of feed composition and upflow velocity on aggregate characteristics in anaerobic upflow reactors by V. O'Flaherty; P. N. L. Lens; D. de Beer; E. Colleran (pp. 102-107).

Two upflow anaerobic hybrid reactors treated lactose and a mixture of ethanol, propionate and butyrate, respectively, at a volumetric loading rate of 3.7 kg chemical oxygen demand (COD) m⁻³day⁻¹, a hydraulic retention time of 5 days and a liquid upflow velocity of 0.01 m/h. Under steady-state conditions, the lactose-fed sludge had much higher (20%–100%) specific methanogenic conversion rates than the volatile-fatty acid␣(VFA)/ethanol-fed sludge for all substrates tested, including VFA. In both reactors, a flocculant sludge developed, although a much higher content of extracellular polysaccharide was measured in the lactose-fed sludge [1900 μg compared to 305 μg uronic acid/g volatile suspended solids (VSS)]. When the liquid upflow velocity of a third, VFA/ethanol-fed reactor was increased to 0.5 m/h, granulation of the sludge occurred, accompanied by a large increase (200%–500%) in the specific methanogenic conversion rates for the syntrophic and methanogenic substrates studied. Granulation reduced the susceptibility of the sludge to flotation. Glucose was degraded at a high rate (100 mg glucose gVSS⁻¹h⁻¹) by the sludge from the third reactor, despite not having been exposed to a sugar-containing influent for 563␣days.

Enhanced mineralization of pentachlorophenol by κ-carrageenan-encapsulated Pseudomonas sp. UG30 by M. B. Cassidy; K. W. Shaw; H. Lee; J. T. Trevors (pp. 108-113).

A pentachlorophenol(PCP)-degrading Pseudomonas sp. strain UG30 was encapsulated in κ-carrageenan for use in PCP degradation. Free and encapsulated cells were compared for their ability to dechlorinate and mineralize 100–800 μg/ml sodium pentachlorophenate in broth. Dechlorination was measured with a chloride ion electrode, and mineralization was measured by ¹⁴CO₂ evolution from radiolabelled [U-¹⁴C]PCP. Free and encapsulated Pseudomonas sp. UG30 cells mineralized up to 200 μg/ml and 600 μg/ml PCP, respectively, after 21 days. Encapsulation of UG30 cells provided a protective effect, allowing dechlorination and mineralization of high levels of PCP to occur.

Enzymatic preparation of d-p -trimethylsilylphenylalanine by Y. Tsuji; H. Yamanaka; T. Fukui; T. Kawamoto; A. Tanaka (pp. 114-119).

In this paper we report on the enzymatic preparation of d-p-trimethylsilylphenylalanine (d-TMS-Phe). First, dl-5-(p-trimethylsilylphenylmethyl)hydantoin␣(dl-TMS-Phe-Hyd) was synthesized chemically and subjected to bacterial hydrolysis to obtain N-carbamoyl-d-p-trimethylsilylphenylalanine (C-d-TMS-Phe), but no strains examined showed sufficient hydantoinase activity on this compound. However, Blastobacter sp. A17p-4, which is known to produce N-carbamoyl-d-amino acid amidohydrolase (DCase), was found to be able to hydrolyze C-dl-TMS-Phe prepared chemically from the hydantoin. When C-dl-TMS-Phe was hydrolyzed with cells of Blastobacter sp. A17p-4, its optical purity was low because N-carbamoyl-l-amino acid amidohydrolase (LCase) coexisted in the cells. DCase and LCase in the cell-free extract of Blastobacter sp. A17p-4 could be separated by DEAE-Sephacel column chromatography. The optimum pH for the hydrolysis of C-dl-TMS-Phe by the partially purified DCase was 8.0 and addition of 2.5 % N,N-dimethylformamide was effective in raising the substrate concentration without inactivation of DCase. Under the optimized conditions, highly optically pure (98 % enantiomeric excess) d-TMS-Phe could be obtained from C-dl-TMS-Phe with partially purified DCase.

Extracellular production of a hybrid β-glucanase from Bacillus by Escherichia coli under different cultivation conditions in shaking cultures and bioreactors by G. Miksch; R. Neitzel; E. Fiedler; K. Friehs; E. Flaschel (pp. 120-126).

Cultivation conditions for the extracellular production of a hybrid β-glucanase from Bacillus were established by using Escherichiacoli JM109 carrying the plasmid pLF3. This plasmid contained a novel secretion system consisting of the kil gene (killing protein) of plasmid ColE1 under the stationary-phase promoter of either the fic or the bolA gene, an omega interposon (Prentki and Krisch 1984) located upstream of the promoters and a hybrid β-glucanase gene of Bacillus. When controlled by the fic promoter, the kil gene led to a higher total production of β-glucanase and a higher protein secretion than when it was under control of the bolA promoter. When the effect of different distances between the stationary-phase promoters and the kil gene was investigated, a shorter distance was generally found to result in a higher secretion. With a complex growth medium, the kinetics of extracellular production of the enzyme depended on several operating variables, such as the salt concentration (NaCl) and the oxygen supply, which were varied by changing the culture volume and the shaking speed. In defined media the secretion of β-glucanase into the medium was increased significantly by the addition of glycerol as a carbon source and by prolonged cultivation. The strain with the highest production and secretion yield of β-glucanase [E. coli JM109(pLF3)] was tested on the fermenter scale.

Breeding of starch-utilizing and itaconic-acid-producing koji molds by interspecific protoplast fusion between Aspergillus terreus and Aspergillus usamii by K. Kirimura; T. Sato; N. Nakanishi; M. Terada; S. Usami (pp. 127-131).

Interspecific protoplast fusion between␣Aspergillus terreus, an itaconic acid producer, and A.␣usamii, a glucoamylase producer, was done to breed new koji molds producing itaconic acid from starch. Protoplast fusion between auxotrophic mutant strains by poly(ethylene glycol) treatment produced prototrophic fusants with a fusion frequency of 10⁻⁵−10⁻⁴. The stabilities of some fusants obtained were confirmed by successive subcultures. Conidial analyses of DNA contents and the number of nuclei indicated that the fusants obtained were haploids like the parental strains. One of the stable fusants, F-112, morphologically resembled A. terreus, and produced maximally 35.9 mg/ml itaconic acid from soluble starch (120 mg/ml) at day 6 of cultivation. This productivity from soluble starch was five times as high as that of A. terreus and 70 % of that of A. terreus from glucose (120 mg/ml).

Lipid storage compounds in marine bacteria by H. M. Alvarez; O. H. Pucci; A. Steinbüchel (pp. 132-139).

Forty psychrophile or psychrotrophic crude-oil-utilizing marine bacteria were investigated for their ability to accumulate lipid storage compounds in the cytoplasm during cultivation under nitrogen-limiting conditions. Most of them (73%) were able to accumulate specialized lipids like polyhydroxyalkanoic acids (PHA) while other lipids such as wax esters occurred in two isolates. Accumulation of PHA occurred predominantly at low temperatures (4–20 °C) as demonstrated for three isolates. Electron microscopy revealed polyphosphate inclusions occurring in two isolates in addition to PHA. Cells of the isolate Acinetobacter sp. 211 were able to synthesize and accumulate lipid inclusions during growth on acetate, ethanol, olive oil, hexadecanol and heptadecane. The composition of the lipid inclusions depended on the compounds provided as carbon source. Wax esters and acylglycerols occurred mainly during the cultivation on olive oil; in contrast, wax esters and free alcohols occurred during cultivation on hexadecanol. Total fatty acids in cells of the Acinetobacter sp. 211 amounted to 25% of the cellular dry weight in olive-oil-grown cells. Palmitic acid was the main fatty acid in the lipids when the cells were cultivated on acetate or ethanol (44% and 32% of total fatty acids respectively). In contrast, fatty acids occurring in the lipids during cultivation on hexadecanol, heptadecane or olive oil were related to the carbon source. The fatty acids present in the accumulated lipids consisted predominantly of saturated and unsaturated straight-chain fatty acids with a chain length ranging from 12 to 18 carbon atoms. Analysis of the lipid-granule-associated proteins in cells of Acinetobacter sp. 211 revealed a protein of 39 kDa as the predominant protein species.

Molecular mass of poly[(R )-3-hydroxybutyric acid] produced in a recombinant Escherichia coli by S. Kusaka; H. Abe; S. Y. Lee; Y. Doi (pp. 140-143).

Poly[(R)-3-hydroxybutyric acid] (PHB) was produced at 37 °C by a recombinant Escherichia coli harboring the Alcaligenes eutrophus biosynthesis phbCAB genes in Luria-Bertani media containing glucose at 10–30 g/l at different pH values and the time-dependent changes in the molecular mass of PHB were studied. PHB polymers accumulated within cells while glucose was present in the medium. The number-average molecular mass of PHB decreased with time during the course of PHB accumulation, and the values for PHB were markedly dependent on the cultivation conditions of the E. coli, ranging from 0.5 MDa to 20 MDa. Under specific conditions (pH 6.0), E. coli produced PHB with an extremely high molecular mass (20 MDa). It has been suggested that a chain-transfer agent is generated in E. coli cells during the accumulation of PHB.

Growth-associated synthesis of poly(hydroxybutyric acid) in Methylobacterium rhodesianum as an expression of an internal bottleneck by J.-U. Ackermann; W. Babel (pp. 144-149).

Methylobacterium rhodesianum MB126 growing on fructose accumulates poly(hydroxybutyric acid) (PHB) during exponential growth in contrast to growth on methanol, where the strain accumulates the polyester in response to limitation of several growth factors. A mathematical description of the kinetics, based on the growth-associated term of product formation, yields a good correlation to the experimental data, as it is validated by the course of PHB content after the substrate shift from methanol to fructose. From a comparison of carbon fluxes with enzyme capacities, we assume a bottleneck in the tricarboxylic acid cycle to be the reason for the growth-associated PHB synthesis. PHB formation from fructose, which can be considered as a kind of fermentation, helps overcome the bottleneck. This hypothesis is supported by the fact that the simultaneous PHB synthesis can be suppressed by an additional supply of NADH via the oxidation of formate.

Degradation of styrene by white-rot fungi by A. Braun-Lüllemann; A. Majcherczyk; A. Hüttermann (pp. 150-155).

Degradation of styrene in the gaseous phase was investigated for white-rot fungi Pleurotus ostreatus (two strains), Trametes versicolor, Bjerkandera adusta and Phanerochaete chrysosporium. Fungi were grown in liquid culture and the gas/mycelium contact surface was enhanced with the help of perlite. The influence of various inducers on styrene degradation was studied. The best inducers for styrene degradation were lignosulphonate for P. ostreatus and T. versicolor and wood meal for B. adusta and P. chrysosoporium. Under these conditions all fungi were able to degrade styrene almost completely in 48 h at a concentration of 44 μmol/250 ml total culture volume; one strain of P. ostreatus was able to remove 88 μmol styrene under these conditions. Three transformation products of [¹⁴C]styrene in cultures of P. ostreatus were identified: phenyl-1,2-ethanediol, 2-phenylethanol and benzoic acid; 4% of the styrene was metabolised to CO₂ in 24 h and no other volatile products were found.

A Pseudomonas putida capable of stereoselective hydrolysis of nitriles by R. D. Fallon; B. Stieglitz; I. Turner Jr. (pp. 156-161).

Pseudomonas putida NRRL-18668 contains a nitrile hydratase capable of stereoselective hydrolysis of 2-(4-chlorophenyl)-3-methylbutyronitrile at more than 90 % enantiomeric excess (ee) to the (S)-amide. This soil isolate was recovered from enrichments using (R,S)-2-methylglutaronitrile as the sole nitrogen source. Enzyme expression is constitutive and does not show a high level of catabolite repression. The organism is capable of growth on a wide variety of aliphatic mono- and dinitrile compounds. The hydrolysis activity on propionitrile is approximately 10.3 μmole h⁻¹ mg wet cells⁻¹. The enzyme in cell-free preparations is inhibited by a number of heavy metals, phenylhydrazine, and cyanide. Substrate specificity is broad with highest rates shown on C₄ and C₅ aliphatic mononitriles. The strain appears somewhat unusual in its dependence on cobalt supplementation for maximum enzyme activity and the ability to hydrolyze some aromatic nitriles. This strain is also capable of a two-step hydrolysis of 2-(4-isobutylphenyl)-propionitrile and 2-(6-methoxy-2-napthyl)-propionitrile to the (S)-acids (ibuprofen and naproxen respectively) with stereoselectivity residing primarily in the aliphatic amidase. This appears to be the first description of a steroselective nitrile hydratase from a gram-negative organism.

Enantioselective reduction of 3,4-methylene-dioxyphenylacetone using Candida famata and Zygosaccharomyces rouxii by M. J. Zmijewski; J. Vicenzi; B. E. Landen; W. Muth; P. Marler; B. Anderson (pp. 162-166).

In an effort to prepare 3,4-methylene-dioxyphenyl-(S)-isopropanol from 3,4-methylene-dioxyphenylacetone, an initial screen of microbes indicated that Candida famata could catalyze this reaction efficiently at low substrate concentration. A dilute, large-scale process was developed to provide experimental material for the chemical synthesis to be explored. However, the productivity number of this process [0.134 g product (g␣wet␣weight cells)⁻¹ day⁻¹ was too low to be practical. C.␣famata was also extremely sensitive to concentrations of both the ketone and the alcohol greater than 2 g/l. A more extensive screen of yeast and fungi revealed that Zygosaccharomyces rouxii was more tolerant to higher substrate concentrations and had a higher productivity number [0.8 g (g wet weight cells)⁻¹ day⁻¹]. These characteristics suggested that Z. rouxii could be used in a large-scale process at high substrate concentrations.

Transformation of indole and quinoline by Desulfobacterium indolicum (DSM 3383) by D. Licht; S. S. Johansen; E. Arvin; B. K. Ahring (pp. 167-172).

Degradation of indole and quinoline by Desulfobacterium␣indolicum was studied in batch cultures. The first step in the degradation pathway of indole and quinoline was a hydroxylation at the 2 position to oxindole and 2-hydroxyquinoline respectively. These hydroxylation reactions followed saturation kinetics. The kinetic parameters for indole were an apparent maximum specific transformation rate (V _Amax) of 263 μmol mg total protein⁻¹ day⁻¹ and an apparent half-saturation constant (K _Am) of 139 μM. The V _Amax for quinoline was 170 μmol mg total protein⁻¹ day⁻¹ and K _Am was 92 μM. Oxindole inhibited indole hydroxylation whereas 2-hydroxyquinoline stimulated quinoline hydroxylation. An adaptation period of approximately 20 days was required before transformation of 2-hydroxyquinoline in cultures previously grown on quinoline. Indole and quinoline were hydroxylated with a lag phase shorter than 4 h in a culture adapted to ethanol. Chloramphenicol inhibited the hydroxylation of indole and quinoline in ethanol-adapted cells, indicating an inducible enzyme system. Chloramphenicol had no effect on the hydroxylation of indole in quinoline-adapted cells or on the hydroxylation of quinoline in indole-adapted cells. This indicated that it was the same inducible enzyme system that hydroxylated indole and quinoline.

d-Methionine preparation from racemic methionines by Proteus vulgaris IAM 12003 with asymmetric degrading activity by E. Takahashi; M. Furui; Hiroyasu Seko; T. Shibatani (pp. 173-179).

The microbial degradation of l-methionine was investigated in order to develop a practical process for d-methionine production from racemic methionines. Among the 1000 culture strains tested, microorganisms belonging to the Achromobacter, Bacillus, Micrococcus, Morganella, Proteus, Providencia, Pseudomonas and Sarcina genera exhibited a high l-methionine-degrading activity. Proteus vulgaris IAM 12003 was determined to be the best strain and was used as a biocatalyst for eliminating the l-isomer. The degradation of l-isomer in this P. vulgaris IAM 12003 cell was assured by the action of l-amino acid oxidase. The maximum rate of l-isomer degradation was obtained at 30 °C and pH 8.0. Under these optimal conditions, the l-isomer in a 100 g/l mixture of racemic methionines was almost degraded within 20 h, with 46.5 g d-methionine/l remaining in the reaction mixture. Crystalline d-methionine, with a chemical purity greater than 99% and optical purity of 99.9% enantiomeric excess, was obtained at a yield of 30% from the reaction mixture by simple purification.

Manganese uptake and toxicity in magnesium-supplemented and unsupplemented Saccharomyces cerevisiae by K. J. Blackwell; J. M. Tobin; S. V. Avery (pp. 180-184).

The magnesium content of Saccharomyces cerevisiae was found to vary by up to fivefold at differing␣ stages of batch growth and during growth in the presence of differing magnesium concentrations. Excess Mg was primarily sequestered in vacuoles. Mn²⁺-uptake experiments revealed that Mg-enriched cells had a markedly reduced capacity for Mn²⁺ accumulation. For example, after 6 h incubation in the presence of 50 μM Mn²⁺, Mn levels were approximately twofold higher in cells previously grown in unsupplemented medium than in those from Mg-supplemented medium. These differences were further accentuated at higher Mn²⁺ concentrations and were not attributable to altered cell-surface charge or altered cell-surface Mn²⁺ binding. Cellular Mg status also influenced Mn toxicity towards S. cerevisiae. During exposure to 5 mM Mn²⁺, 50% reductions in the viability of cells with initial Mg contents of approximately 1400 and 2700 nmol (10⁹ cells)⁻¹ occurred after approximately 1.6 h and 3.6 h respectively. In cells containing 3300 nmol Mg (10⁹ cells)⁻¹, more than 75% viability was still maintained after 7 h incubation with 5 mM Mn²⁺. It is concluded that Mn²⁺ uptake and toxicity in S. cerevisiae are strongly influenced by intracellular Mg, possibly through Mg-dependent regulation of divalent-cation transport activity.

Aerobic degradation of olive mill wastewaters by J. Benitez; J. Beltran-Heredia; J. Torregrosa; J. L. Acero; V. Cercas (pp. 185-188).

The degradation of olive mill wastewater by aerobic microorganisms has been investigated in a batch reactor, by conducting experiments where the initial concentration of organic matter, quantified by the chemical oxygen demand, and the initial biomass were varied. The evolution of the chemical oxygen demand, biomass and the total contents of phenolic and aromatic compounds were followed through each experiment. According to the Contois model, a kinetic expression for the substrate utilization rate is derived, and its biokinetic constants are evaluated. This final predicted equation agrees well with all the experimental data.

Influence of the starting microbial nucleus type on the anaerobic granulation dynamics by R. El-Mamouni; R. Leduc; S. R. Guiot (pp. 189-194).

The influence of four different granulation precursors, syntroph-enriched methanogenic consortia, Methanosaeta-enriched, Methanosarcina-enriched nuclei and acidogenic flocs, on the time course of complex granule development and the lag time for start-up was investigated in four upflow anaerobic sludge-bed and filter reactors. Although the operational conditions allowed the maintenance of the same specific growth rate of biomass in the four reactors, granulation proceeded rapidly with syntroph/methanogenic consortia, Methanosaeta and Methanosarcina nuclei. However, granulation was significantly retarded when acidogenic flocs were used as precursors. The granule mean Sauter diameter increased rapidly in the reactor inoculated with syntroph/methanogenic consortia, Methanosaeta and Methanosarcina nuclei and reached, at the end of the experiment, 3.1, 2.7 and 2.4 mm compared to 1.1 mm in that inoculated with acidogenic flocs. This corresponded to a rate of granule size increase of 31, 21, 18 μm/day in syntroph/methanogenic consortia, Methanosaeta and Methanosarcina nuclei, respectively, compared to 7 μm/day in acidogenic flocs. Biomass specific activities (i.e. acidogenic, syntrophic and methanogenic activities) increased stepwise in all reactors with time, especially in those inoculated with syntroph/methanogenic consortia and Methanosaeta nuclei. From these results it appears that syntrophs and Methanosaeta spp. play an important role in the anaerobic granulation process.

Acknowledgement to Reviewers 1996 (pp. 195-198).

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Applied Microbiology and Biotechnology (v.47, #2)