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Analytical and Bioanalytical Chemistry (v.369, #3-4)
Capillary electrophoresis as a tool for optimization of multiplex PCR reactions by J. M. Butler; Christian M. Ruitberg; Peter M. Vallone (pp. 200-205).
Copying multiple regions of a DNA molecule is routinely performed today using the polymerase chain reaction (PCR) in a process commonly referred to as multiplex PCR. The development of a multiplex PCR reaction involves designing primer sets and examining various combinations of those primer sets and different reaction components and/or thermal cycling conditions. The process of optimizing a multiplex PCR reaction in order to obtain a well-balanced set of amplicons can be time-consuming and labor-intensive. The rapid separation and quantitation capabilities of capillary electrophoresis make it an efficient technique to help in the multiplex PCR optimization process.
Neurotransmitter sampling and storage for capillary electrophoresis analysis by X. Zhang; Robert R. Fuller; Robin L. Dahlgren; Kurt Potgieter; Rhanor Gillette; J. V. Sweedler (pp. 206-211).
Quantitative analysis of signaling molecules from single cells and cellular materials requires careful validation of the analytical methods. Strategies have been investigated that enable single neurons and neuronal tissues to be stored before being assayed for many low-weight, biologically active molecules, such as serotonin, dopamine, and citrulline. Both metacerebral cell and pedal ganglia homogenates isolated from Pleurobranchaea californica have been studied by capillary electrophoresis with two complimentary laser-induced fluorescence detection methods. For homogenized ganglia samples, several cellular analytes (such as arginine and citrulline) are unaffected by standing at room temperature for days. Many other analytes in the biological matrix, including the catecholamines and indolamines, degrade by 20% within 10 h at room temperature. Rapidly freezing samples or preserving them with ascorbic acid preserves more than 80% of the dopamine and about 70% of the serotonin even after five days. In addition, serotonin and dopamine remain completely stable for at least five days by combining the ascorbic acid preservation and freezing at –20 °C. The timing of preservation is critical in maintaining the original composition of the biological samples. Using our optimum storage protocol of freezing the sample within 2 h after isolation, we can store frozen homogenate ganglia samples for more than four weeks before assay while still obtaining losses less than 10% of the original serotonin and dopamine. The nanoliter-volume single cell samples, however, must be analyzed within 4 h to obtain losses of less than 10% for serotonin related metabolites.
Quantitative determination of clenbuterol, salbutamol and tulobuterol enantiomers by capillary electrophoresis by J. Vela; Enrique G. Yanes; A. M. Stalcup (pp. 212-219).
Enantiomers of clenbuterol, salbutamol and tulobuterol were directly separated and quantitated from a spiked sample by capillary electrophoresis (CE) using sulfated β-cyclodextrin (SCD) as chiral selector and phosphate as running buffer. The SCD and buffer concentration, pH and field strength were the parameters studied to optimize the separation. Optimal separation was obtained using 50 mM of phosphate monobasic at pH = 2.24, 0.25% (w/w) of sulfated cyclodextrin and a field strength of 10 kV, with 20 min total time analysis. Comparison between two different injection modes (hydrodynamic and electrokinetic) was made. In the hydrodynamic mode, repeatability (expressed as relative standard deviation, RSD) was less than 1.2% for migration times for all the analyte peaks and less than 2% for peak area percentages. With respect to reproducibility, RSD was less than 3.8% for migration time and less than 3% for peak area percentages. Calibration curves were set up for two different sample concentration ranges (1 to 10 μg mL–1 and 160– 800 ng mL–1, of each of the racemates studied). Although the electrokinetic injection mode for an aqueous sample appeared to suffer from some enantiodiscrimination, calibration curves were linear in the range between 1 and 10 ng mL–1 with regression coefficients ranging from 0.9996 to 0.9952. As in the case of hydrodynamic injection, the method was tested with a spiked sample.
Determination of enterostatin in human cerebrospinal fluid by capillary electrophoresis with laser induced fluorescence detection by Shulin Zhao; Chandan Prasad; Hugh J. F. Robertson; Y.-M. Liu (pp. 220-224).
A capillary electrophoresis (CE) method with laser induced fluorescence (LIF) detection is described for quantification of enterostatin (Val-Pro-Asp-Pro-Arg), a pentapeptide involved in appetite regulation and insulin secretion. Enterostatin and two other pentapeptides belonging to the enterostatin family (i.e. Ala-Pro-Gly-Pro-Arg and Val-Pro-Gly-Pro-Arg) were well separated from each other. The peptides were fluorescently tagged with naphthalene-2,3- dicarboxaldehyde (NDA) and separated by micellar electrokinetic chromatography (MEKC) in the presence of methanol as an organic modifier. Coupled with LIF detection, the method had a detection limit of 4.8 × 10–6 M for enterostatin. The relative standard deviation was to be 4.0% from five determinations of enterostatin at 37.2 μM in a human cerebrospinal fluid (CSF) sample. Twenty-three human CSF samples were analyzed. The level of enterostatin ranged from 24 μM to 51 μM with a mean (± SEM) value of 41.7 ± 2.0 μM.
Electrospray ionization gas-phase electrophoresis under ambient conditions and it’s potential or high-speed separations by D. C. Collins; M. L. Lee (pp. 225-233).
A moderately high resolution nanoelectrospray ionization gas-phase electrophoresis instrument was constructed and evaluated for simple high-speed separations of several groups of compounds. The insertion of a plate containing a 1.6 cm diameter exit orifice, 2.5 cm from the location of electrospray, allowed ions to be created and desolvated under ambient conditions with minimal solvent contamination to the drift tube. Ion separation selectivity is discussed and shown to be slightly altered by changing the drift gas flow rate. Issues of using gas-phase electrophoresis as a high-speed separation technique are discussed. Gas-phase electrophoresis-spectra of selected benzodiazepines, triazine herbicides, and simple combinatorial chemistry libraries are demonstrated.
Gas-phase separations of complex tryptic peptide mixtures by J. A. Taraszka; A. E. Counterman; D. E. Clemmer (pp. 234-245).
High-resolution ion mobility and time-of-flight mass spectrometry techniques have been used to analyze complex mixtures of peptides generated from tryptic digestion of fourteen common proteins (albumin, bovine, dog, horse, pig, and sheep; aldolase, rabbit; β-casein, bovine; cytochrome c, horse; β–lactoglobulin, bovine; myoglobin, horse; hemoglobin, human, pig, rabbit, and sheep). In this approach, ions are separated based on differences in mobilities in helium in a drift tube and on differences in their mass-to-charge ratios in a mass spectrometer. From data recorded for fourteen individual proteins (over a m/z range of 405 to 1000), we observe 428 peaks, of which 205 are assigned to fragments that are expected from tryptic digestion. In a separate analysis, the fourteen mixtures have been combined and analyzed as one system. In the single dataset, we resolve 260 features and are able to assign 168 peaks to unique peptide sequences. Many other unresolved features are observed. Methods for assigning peptides based on the use of m/z information and existing mobilities or mobilities that are predicted by use of intrinsic size parameters are described.
Detection of double-stranded PCR amplicons at the attomole level electrosprayed from low nanomolar solutions using FT-ICR mass spectrometry by James C. Hannis; David C. Muddiman (pp. 246-251).
An 82-base-pair polymerase chain reaction (PCR) product was amplified from the tetranucleotide short tandem repeat locus within the human tyrosine hydroxylase gene. PCR amplification was carried out using 100 ng of human nuclear DNA obtained from an individual who is homozygotic for the 9.3 allele resulting in a 50.5 kDa amplicon. To generate sufficient material for these investigations, several reactions were pooled and subsequently purified and quantified using UV-vis spectrophotometry. A serial dilution was carried out from a 2 μM stock solution providing solution concentrations down to 5 nM. Measurements were made using hexapole accumulation and gated trapping strategies in a 4.7 Telsa Fourier transform ion cyclotron resonance mass spectrometer (FTICR-MS) which facilitated detection of the amplicon at the attomole level when electrosprayed from a 5 nM solution with a single acquisition! The signal-to-noise ratio was determined to be 8.3 for the spectrum derived from the 5 nM solution using the magnitude-mode mass spectral peak height for the most abundant charge-state. This remarkable sensitivity for large PCR amplicons will dramatically improve the ability of electrospray ionization mass spectrometry to address important genetic questions for low copy number genes or when the amount of initial template is limited; the latter issue is commonly encountered in DNA forensics. Furthermore, these data represents over 2 orders of magnitude decrease in detection limits over other existing ESI-MS reports concerning PCR products, including those conducted using FTICR-MS.
Mapping tertiary interactions in protein folding reactions: a novel mass spectrometry- and chemical synthesis-based approach by J. A. Moss; P. Silinski; M. C. Fitzgerald (pp. 252-257).
A novel mass spectrometry- and chemical synthesis-based approach for studying protein folding reactions is described, and its initial application to study the folding/unfolding reaction of a homo-hexameric enzyme 4-oxalocrotonate (4OT) is reported. This new approach involves the application of total chemical synthesis to prepare protein analogues that contain a photoreactive amino acid site-specifically incorporated into their primary amino acid sequence. To this end, a photoreactive amino acid-containing analogue of 4OT in which Pro-1 was replaced with p-benzoyl-l-phenylalanine (Bpa) was prepared. This analogue can be used to map structurally specific protein-protein interactions in 4OT’s native folded state. These photocrosslinking studies and peptide mapping results with (P1Bpa)4OT indicate that this construct is potentially useful for probing the structural properties of equilibrium and kinetic intermediates in 4OT’s folding reaction.
Luminescent proteins from Aequorea victoria: applications in drug discovery and in high throughput analysis by Sapna K. Deo; S. Daunert (pp. 258-266).
Recent progress in generating a vast number of drug targets through genomics and large compound libraries through combinatorial chemistry have stimulated advancements in drug discovery through the development of new high throughput screening (HTS) methods. Automation and HTS techniques are also highly desired in fields such as clinical diagnostics. Luminescence-based assays have emerged as an alternative to radiolabel-based assays in HTS as they approach the sensitivity of radioactive detection along with ease of operation, which makes them amenable to miniaturization. Luminescent proteins provide the advantage of reduced reagent and operating costs because they can be produced in unlimited amounts through the use of genetic engineering tools. In that regard, the use of two naturally occurring and recombinantly produced luminescent proteins from the jellyfish Aequorea victoria, namely, aequorin and the green fluorescent protein (GFP), has attracted attention in a number of analytical applications in diverse research areas. Aequorin is naturally bioluminescent and has therefore, virtually no associated background signal, which allows its detection down to attomole levels. GFP has become the reporter of choice in a variety of applications given that it is an autofluorescent protein that does not require addition of any co-factors for fluorescence emission. Furthermore, the generation of various mutants of GFP with differing luminescent and spectral properties has spurred additional interest in this protein. In this review, we focus on the use of aequorin and GFP in the development of highly sensitive assays that find applications in drug discovery and in high throughput analysis.
Comparison of sieving matrices for on-the-fly fluorescence lifetime detection of dye-labeled DNA fragments by Lijuan Li; L. B. McGown (pp. 267-272).
Commercially available, replaceable sieving matrices and their solvent modulated forms were evaluated for use in on-the-fly fluorescence lifetime detection of dye-labeled DNA fragments in capillary electrophoresis. The fragments were labeled with dyes that can be excited by the 488 nm line of an argon ion laser and have lifetimes in the range of 0.8 ns to 3.8 ns. The sieving matrices and buffer systems included poly(vinylpyrrolidone) (PVP), poly(ethyleneoxide) (PEO), hydroxyethylcellulose (HEC), Tris-borate-EDTA (TBE) and Tris-TAPS-EDTA buffers modified with DMSO and formamide. Selection of the optimal sieving matrix is based on the separation efficiency and the enhancement of lifetime resolution of DNA fragments. Best results for both electrophoretic resolution and lifetime detection were obtained using a poly(ethyleneoxide)/TBE gel buffer in the presence of 10% formamide.
Development of a sensitive enzyme immunoassay for the detection of phenyl-β-d-thioglucuronide in human urine by Norbert Staimer; Shirley J. Gee; Bruce D. Hammock (pp. 273-279).
Immunoassays for the measurement of glucuronides in human urine can be a helpful tool for the assessment of human exposure to toxic chemicals. Therefore an enzyme immunoassay (EIA) for the specific detection of phenyl-β-d-thioglucuronide was developed. The immunoconjugate was formed by coupling p-aminophenyl-β-d-thioglucuronide to the carrier protein thyroglobulin leaving an exposed glucuronic acid. The hapten-protein conjugate was adsorbed to gold colloids in order to enhance the immunogenic effect. Rabbits were injected with the immunogold conjugates to raise polyclonal antibodies. The resulting competitive assay showed an inhibition by phenyl-β-d-thioglucuronide at sample concentrations of 23.0 ± 1.3 ng/mL (50% B/B0) and a high cross-reactivity to p-aminophenyl-β-D-thioglucuronide (120%). Little cross-reactivities (< 2%) were observed for potential urinary cross reactants. In addition human urine samples were incubated with β-glucuronidase in order to investigate the EIA for specific matrix effects. An integration of high-performance liquid chromatography (HPLC) and EIA was developed in an attempt to decrease the matrix effects and increase the sensitivity of the overall method. The hyphenated technique HPLC-EIA may be used to monitor human exposure to toxic thiophenol which is excreted by mammals as urinary phenyl thioglucuronide.
Improving the activity of immobilized subtilisin by site-directed attachment through a genetically engineered affinity tag by Jianquan Wang; D. Bhattacharyya; L. G. Bachas (pp. 280-285).
An octapeptide affinity tag, Asp-Tyr-Lys-Asp-Asp-Asp-Asp-Lys (termed FLAG), was genetically fused to the C-terminus of subtilisin BPN′ (SBT) from Bacillus amyloliquefaciens. The fusion protein SBT-FLAG was immobilized to nonporous polystyrene and silica beads both in a site-directed and a random fashion. Site-directed immobilization was achieved by employing the interaction between protein A and a monoclonal antibody specific for the FLAG peptide, while random immobilization was obtained by using glutaraldehyde as a cross-linking reagent. The activity of the immobilized enzymes was compared. It was found that the site-directed subtilisin had higher catalytic efficiency, kcat/KM, which was more than 7-fold of that of the randomly immobilized enzyme. It was also noted that the site-directly immobilized enzyme had superior storage stability over the homogeneous enzyme.
Analytical performance characteristics of thin and thick film amperometric microcells by Robert E. Gyurcsányi; Alessandra Cristalli; Géza Nagy; Livia Nagy; Cara Corder; Bradford D. Pendley; Stefan Ufer; H. Troy Nagle; Michael R. Neuman; E. Lindner (pp. 286-294).
The analytical performance of amperometric microcells with different electrode geometries is compared for enzyme activity measurements. The microcells were fabricated with thin film photolithography or thick film screen-printing in four different designs. The cells made with the thin film process used flexible substrate with microelectrode array or a circular, disk-shaped working electrode. The screen-printed working electrodes had semicircle or disk shape on ceramic chips. Putrescine oxidase (PUO) activity measurement was used as a model. The determination of PUO activity is important in the clinical diagnosis of premature rupture of the amniotic membrane. An electropolymerized m-phenylenediamine size-exclusion layer was used to eliminate common interferences. The size exclusion layer revealed also to be advantageous in protecting the electrodes from fouling by putrescine (enzyme substrate). The electrode fouling of bare electrodes was insignificant for screen-printed electrodes, but very severe for electroplated platinum working electrodes. The microelectrode array electrodes demonstrated smaller RSD and higher normalized sensitivities for hydrogen peroxide and PUO activity. All the other electrodes were demonstrating comparable analytical performances.
Detection of E. coli using a microfluidics-based antibody biochip detection system by David L. Stokes; G. D. Griffin; Tuan Vo-Dinh (pp. 295-301).
This work demonstrates the detection of E. coli using a 2-dimensional photosensor array biochip which is efficiently equipped with a microfluidics sample/reagent delivery system for on-chip monitoring of bioassays. The biochip features a 4 × 4 array of independently operating photodiodes that are integrated along with amplifiers, discriminators and logic circuitry on a single platform. The microfluidics system includes a single 0.4 mL reaction chamber which houses a sampling platform that selectively captures detection probes from a sample through the use of immobilized bioreceptors. The independently operating photodiodes allow simultaneous monitoring of multiple samples. In this study the sampling platform is a cellulosic membrane that is exposed to E. coli organisms and subsequently analyzed using a sandwich immunoassay involving a Cy5-labeled antibody probe. The combined effectiveness of the integrated circuit (IC) biochip and the immunoassay is evaluated for assays performed both by conventional laboratory means followed by detection with the IC biochip, and through the use of the microfluidics system for on-chip detection. Highlights of the studies show that the biochip has a linear dynamic range of three orders of magnitude observed for conventional assays, and can detect 20 E. coli organisms. Selective detection of E. coli in a complex medium, milk diluent, is also reported for both off-chip and on-chip assays.
Atomic force microscopy for the characterization of immobilized enzyme molecules on biosensor surfaces by Peng Zhang; Weihong Tan (pp. 302-307).
The development of biosensors has been one of the key areas in biotechnology and biomedical studies. Often it is difficult to investigate the immobilized biomolecules on the surfaces for biosensor optimization. Atomic force microscopy (AFM) should provide an ideal means for the visualization of biosensor surface and for the investigation of biomolecule activities. Therefore, AFM has been employed to study the surface topography of immobilized glutamate dehydrogenase (GDH) on two-dimensional glutamate biosensor surfaces. Correlation between the surface topography and the activity of the biosensor was investigated. Surface analysis has revealed that the enzymatic activity of the immobilized GDH molecules on the biosensor surface is linked to surface roughness, as measured by the peak-to-valley distance. Fractal dimension of the immobilization sensor surface was found to be a good parameter for judging the quality of the immobilized biosensors. As enzyme immobilization time increases, the biosensor has its maximum activity with around 18 h of immobilization in 10–6 M GDH solution. Various biosensors prepared under different experimental conditions have been studied by AFM. This technique is shown to be an effective tool to characterize biosensor surfaces.
Evaluation of NMR diffusion measurements for the conformational analysis of flexible peptides by S. A. Rogers-Sanders; D. Vander Velde; C. K. Larive (pp. 308-312).
The use of diffusion coefficients measured with pulsed-field gradient NMR spectroscopy for the determination of the relative population of conformers in solutions of the human Growth Hormone peptide fragment, hGH(9–19), has been studied in aqueous and in trifluoroethanol (TFE)/ water solutions. The peptide is a good model compound for this study because it adopts a predominantly random coil conformation in aqueous solution and is helical in TFE. The results of the diffusion measurements suggest that the peptide exhibits predominantly random coil structures in aqueous solution and adopts a more helical conformation in solutions containing increasing mole fractions of TFE, consistent with the qualitative findings of the standard CD and NMR experiments to probe peptide conformation. These results indicate that diffusion coefficients measured with NMR can provide additional information about temperature- and solvent-induced changes in the extent of the helical conformer for hGH(9–19) in aqueous solution and in solutions containing various mole fraction of TFE, respectively.
Development and analytical applications of multispectral imaging techniques: An overview by C. D. Tran (pp. 313-319).
A multispectral imaging spectrometer is an instrument that can simultaneously record spectral and spatial information of a sample. Chemical and physical properties of the sample can be elucidated from such images. By synergistic use of an acousto-optic tunable filter and a progressive scan camera capable of snap shot recording it was possible to develop a novel imaging spectrometer with a spatial resolution of a few microns and which can record, grab and store up to 33 images per second (at a function of time) or 16 images per second (as a function of wavelength). This overview article summarizes the instrumentation development of various imaging spectrometers and their applications including its use as the detector for the determination of identity and sequences of peptides synthesized by the combinatorial solid phase method.
LIBS using dual- and ultra-short laser pulses by S. M. Angel; Dimitra N. Stratis; Kristine L. Eland; Tianshu Lai; Mark A. Berg; David M. Gold (pp. 320-327).
Pre-ablation dual-pulse LIBS enhancement data for copper, brass and steel using ns laser excitation are reported. Although large enhancements are observed for all samples, the magnitude of the enhancement is matrix dependent. Whereas all of the dual-pulse studies used ns laser excitation we see interesting effects when using ps and fs laser excitation for single-pulse LIBS. LIBS spectra of copper using 1.3 ps and 140 fs laser pulses show much lower background signals compared to ns pulse excitation. Also, the atomic emission decays much more rapidly with time. Because of relatively low backgrounds when using ps and fs pulses, non-gated detection of LIBS is shown to be very effective. The plasma dissipates quickly enough using ps and fs laser pulses, that high pulse rates, up to 1000 Hz, are effective for increasing the LIBS signal, for a given measurement time. Finally, a simple near-collinear dual-pulse fiber-optic LIBS probe is shown to be useful for enhanced LIBS measurements.
Vibrational spectroscopy of dimethylchlorooctadecylsilane covalently bonded to ultrathin silica films immobilized on Ag surfaces by M. Cai; J. E. Pemberton (pp. 328-334).
FTIR and Raman spectroscopies have been used to characterize the structure and conformational order of dimethylchlorooctadecylsilane (DOS) covalently bonded to ultrathin silica films supported on Ag substrates. Ultrathin silica films of ca. 30 Å thickness prepared from sol-gel methods are immobilized on Ag surfaces modified with a self-assembled monolayer of (3-mercaptopropyl)trimethoxysilane (3MPT). This layered structure provides a unique opportunity for acquiring complementary spectral data from both FTIR and Raman spectroscopies, which are useful in elucidating alkylsilane conformation pertaining to stationary phases for reversed-phase liquid chromatography (RPLC). Characterization of octadecyltrichlorosilane (OTS) layers on thin silica films of ca. 800 Å thickness on 3MPT-modified Ag surfaces has been reported previously. Differences between the ultrathin silica films used in this study and the thin silica films used in this previous study are considered. The results from both FTIR and Raman spectroscopy presented here suggest that bonded DOS alkyl chains are in a disordered, liquid-like state with close to monolayer surface coverage.
Characterization of isopoly tungstate using time-of-flight electrospray mass spectrometry by Craig S. Truebenbach; D. M. Hercules; Marwan Houalla (pp. 335-341).
Electrospray time-of-flight (TOF) mass spectrometry has been carried out on aqueous solutions of isopoly tungstate. A number of factors affecting the speciation of tungstate were studied, including concentration, and pH. The concentrations of the solutions ranged from 10–2 to 10–5 M. At all concentrations studied, the pH range was sufficient to investigate all major species expected to be in aqueous solution. In all cases, the results obtained by electrospray showed changes in speciation which were limited to protonation and solvation effects; the tungstate core remained intact.
X-ray photoelectron spectroscopic studies of the oxidation of aluminium by liquid water monitored in an anaerobic cell by J. A. Rotole; P. M. A. Sherwood (pp. 342-350).
The oxidation of clean polycrystalline aluminium foil was performed in a previously described anaerobic cell and studied by core level and valence band X-ray photoelectron spectroscopy. Oxide free sample surfaces were exposed under inert atmosphere at room temperature to increasingly oxidative environments of water vapor and liquid water beginning with an oxide free metal foil each time. Minor oxidative environments were found to produce a film of boehmite with a thinner outer film of gibbsite. Harsher oxidation in liquid water resulted in an oxide film much thicker than that found on the as received sample which contained an inner composition of gamma alumina with an outer film of gibbsite. As expected, the oxide film observed for ultra high purity polycrystalline aluminium foil in the as received state was gibbsite. The valence band of the cleaned metal is discussed in terms of residual surface species. The evaluation and determination of these residual surface species is evaluated following an analysis of two different band structure calculations which use different d orbital exponents. It is found that while the density of states is almost unaltered by changes in the d exponent, the predicted spectrum is substantially changed. The work makes extensive use of valence band X-ray photoelectron spectroscopy.
Spectral tolerance determination for multivariate optical element design by M. L. Myrick; O. Soyemi; H. Li; L. Zhang; D. Eastwood (pp. 351-355).
Recent reports from our laboratory have described a method for all-optical multivariate chemometric prediction from optical spectroscopy. The concept behind this optical approach is that a spectral pattern (a regression vector) can be encoded into the spectrum of an optical filter. The key element of these measurement schemes is the multivariate optical element (MOE), a multiwavelength interference-based spectral discriminator that is tied to the regression vector of a particular measurement. The fabrication of these MOEs is a complex operation that requires precise techniques. However, to date, no quantitative means of determining the allowable design/ manufacturing errors for MOEs has existed. The purpose of the present report is to show how the spectroscopy of a sample is used to define the accuracy with which MOEs must be designed and manufactured. We conclude this report with a general treatment of spectral tolerance and a worked example. The worked example is based on actual experimental measurements. We show how the spectral bandpass is defined operationally in a real problem, and how the statistics of the theoretical regression vector influence both the bandpass and the minimum tolerances. In the experimental example, we demonstrate that tolerances range continuously between 1 (totally tolerant) to approximately 10–3 (0.1% T) in this problem.
Determination of polychlorinated dibenzo-p-dioxin and dibenzofuran congeners in air particulate and marine sediment standard reference materials (SRMs) by Chung H. Chiu; Richard Turle; Gary Poole; Benoit Thibert; W. Wayne Brubaker Jr.; Michele M. Schantz; S. A. Wise (pp. 356-363).
Due to the limited number of environmental matrix certified reference materials (CRMs) with assigned values for natural levels of polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs), an interlaboratory study was undertaken by the National Institute of Standards and Technology (NIST) and Environment Canada to establish reference concentration values for selected PCDD/Fs in two well-characterized NIST Standard Reference Materials (SRMs): SRM 1649a (Urban Dust) and SRM 1944 (New York/New Jersey Waterway Sediment). Results from 14 laboratories were used to provide reference values for the seventeen 2, 3, 7, 8-substituted PCDD/F congeners, the totals for individual tetra- through hepta-substituted PCDD/F homologues, and the total amount of tetra-through hepta-substituted PCDD/Fs. The mass fractions for the individual 2, 3, 7, 8-substituted congeners range from approximately 0.01 μg/kg to 7 μg/kg dry mass.
Certification of the methylmercury content in SRM 2977 Mussel Tissue (organic contaminants and trace elements) and SRM 1566b Oyster Tissue by S. Tutschku; M. M. Schantz; M. Horvat; M. Logar; H. Akagi; H. Emons; M. Levenson; S. A. Wise (pp. 364-369).
The methylmercury content in two new marine bivalve mollusk tissue Standard Reference Materials (SRMs) has been certified using results of analyses from the National Institute of Standards and Technology (NIST) and two other laboratories. The certified concentrations of methylmercury were established based on the results from four and six different (independent) analytical methods, respectively, for SRM 1566b Oyster Tissue (13.2 ± 0.7 μg/kg) and SRM 2977 Mussel Tissue (organic contaminants and trace elements) (36.2 ± 1.7 μg/kg). The certified concentration of methylmercury in SRM 1566b is among the lowest in any certified reference material (CRM).
LC-MS/MS signal suppression effects in the analysis of pesticides in complex environmental matrices by B. K. Choi; D. M. Hercules; A. I. Gusev (pp. 370-377).
The application of LC separation and mobile phase additives in addressing LC-MS/MS matrix signal suppression effects for the analysis of pesticides in a complex environmental matrix was investigated. It was shown that signal suppression is most significant for analytes eluting early in the LC-MS analysis. Introduction of different buffers (e.g. ammonium formate, ammonium hydroxide, formic acid) into the LC mobile phase was effective in improving signal correlation between the matrix and standard samples. The signal improvement is dependent on buffer concentration as well as LC separation of the matrix components. The application of LC separation alone was not effective in addressing suppression effects when characterizing complex matrix samples. Overloading of the LC column by matrix components was found to significantly contribute to analyte-matrix co-elution and suppression of signal. This signal suppression effect can be efficiently compensated by 2D LC (LC-LC) separation techniques. The effectiveness of buffers and LC separation in improving signal correlation between standard and matrix samples is discussed.
Spectrochemical investigations in molecularly organized solvent media: evaluation of pyridinium chloride as a selective fluorescence quenching agent of polycyclic aromatic hydrocarbons in aqueous carboxylate-terminated poly(amido) amine dendrimers and anionic micelles by D. A. Wade; C. Mao; A. C. Hollenbeck; S. A. Tucker (pp. 378-384).
The ability of pyridinium chloride (PC) to selectively quench alternant as opposed to nonalternant polycyclic aromatic hydrocarbons (PAHs) in organized media is examined. PC was previously shown to be a selective quenching agent of alternant PAHs in neat polar solvents. Carboxylate-terminated poly(amido) amine (PAMAM-CT) dendrimers and anionic surfactants – sodium dodecanoate (SD), sodium octanoate (SO), and sodium dodecylsulfate (SDS) – were chosen as the solubilizing media for this study. Selective quenching of alternant PAHs is observed in the presence of the SDS and SO micelles. However, the extent of PAH quenching in SO is significantly reduced compared to PAHs dissolved in either water or SDS micelles. In the case of the smaller generation 4.5 (G4.5) PAMAM-CT dendrimers, PC was prevented from quenching both alternant and nonalternant PAHs to any appreciable extent. The dendrimer is able to “protect” the PAHs from the PC quencher that resides at the dendrimer surface. Both, SD and G5.5 PAMAM-CT precipitated out of solution with the addition of PC. Differences between traditional micelles and “unimolecular micelle” dendrimers were also examined. These studies further confirm that the PAHs did not reside in the “analogous” palisade region of the dendrimers as they do in micelles. The PAHs must reside in the outermost branches of the dendrimer, but sufficiently far enough away from the charged surface groups, where PC associated, to prevent fluorescence quenching. This work further illustrates the differences between “unimolecular micelle” dendrimers and traditional micelles.
Retention behavior of large polycyclic aromatic hydrocarbons on metalloprotoporphyrin-silica stationary phases by S. Chen; J. C. Fetzer; M. E. Meyerhoff (pp. 385-392).
The retention behavior of large polycyclic aromatic hydrocarbons (LPAHs) (≥ 7 rings) on newly developed metalloprotoporphyrin (MProP)-silica stationary phases is examined and the results are compared to previously reported data for retention of the same solutes on commercially available phases. HPLC columns packed with FeProP-silica are shown to exhibit unique shape selectivity for LPAH retention, with the planar LPAHs always retained much longer than corresponding non-planar solutes. Solute planarity, length to breadth ratio (L/B value), and number of carbon atoms within the LPAHs are all demonstrated to contribute to the retention sequence observed. Further, the retention of LPAH solutes on FeProP-silica phases is shown to be more predictable than on other reversed-phase columns, with the elution sequence constant regardless of the mobile phase composition. Due to the extremely high planar selectivity of FeProP-silicas with respect to LPAH retention, it is envisioned that columns packed with these phases could be used in conjunction with existing commercial columns to devise methods for more efficient separation of complex mixtures of LPAHs in environmental and other samples.
Determination of energetic materials in soil using multivariate analysis of Raman spectra by D. S. Moore (pp. 393-396).
Contamination of soils by energetic materials (EMs) is an important issue in many locations (such as test mounds, ordnance depots, and manufacturing sites). Raman spectroscopy can be useful as a screening technique at the percent level (by mass) if interference from soil fluorescence can be overcome. Multivariate analysis is shown capable of both extracting the Raman signatures of EMs from spectra obscured by large fluorescence backgrounds caused by soil components, and generating calibration curves for the EMs at the percent level.